Table 1 Comparing characteristics between CaReAl and IGV ‘snapshot’
From: CaReAl: capturing read alignments in a BAM file rapidly and conveniently
Features | CaReAl | IGV ‘snapshot’ |
|---|---|---|
Language | Python and R | Java |
Timea | 5.26 min/100 imgs | 39.47 min/100 imgs |
(Avg. 3.16 sec/img) | (Avg. 23.68 sec/img) | |
Parallel computing | ✓ | ✘ |
Display inserted base(s) | ✓ | ✘ |
Support full-depth | ✓ | ✘ |